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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015864256.1_cds_XP_016515929.1_28221
CDS Infomation

[gene=LOC107832585] [db_xref=GeneID:107832585] [protein=uncharacterized RNA pseudouridine synthase aq_1464-like isoform X1] [protein_id=XP_016515929.1] [location=complement(join(20756..20840,22135..22190,22335..22391,24219..24369,24921..24969,25108..25201,25427..25499,25601..25701,25809..25888,26330..26831))] [gbkey=CDS]
Sequence

ATGGCGACGATTGCAGCCGCCGTAGCGGCGGCTTCCTCCGCCTTCACCTCCCTCCACCTC
ACTCGCGCAACTCCCTACACGCGCCGCCACATTCATACTCTCATCACATCCTCACTCTCC
TCTTCCTCCTCAACTGAATTCAACATCACCTTCGCTCCTCCAAAACCAAAACTCAATAAA
CCAGAACCCTCACTTCCCAGAAACCCTAATTCCAACTCGGACATTGCCGAACTCGGTGAT
CAACTCTATATCCCCTGGATTGTTCGTGATGAAAAAGGTAACCTCACTCTCCAATCGACT
CCTCCGGCGCGTCTACTCCACGACATGGCTAATGCTAGCACAAGTAAGAAGAATAATAAG
AAGAGCAAACAGATTGCTTCTAAAGCCGCGACGGTGGGTCCTACAGCTGAACCTAAGTAT
TCAAAAGCGGCTCGCCGGTTTTATAATGAGAATTTTAGAGACCCTCCTCAACGCCTCAGT
AAAGTCCTTGCTGCTTCCGGAGTGGCATCCAGACGGAGCAGTGAAGAGCTGATTTTTCAA
GGTCGGGTTACTGTGAATGGTTCTGTTTGCAAAACTCCACAGACTAAAGTAGATCCAGCT
AGGGATGTAATTTATGTCAATGGAAATCGTCTTCCTAAGAAATTGCCTTCAAAGGTCTAT
CTTGCACTAAACAAGCCTAAAGGGTACATATGCTCATCCGGGGAGAAAGAAACTAAGTCA
GTCATGTCTCTTTTTGATAATTTTGTAAAGAGTTGGGATAAAAGGCATCCTGGACAACCA
AAACCTCGGCTCTTTACAGTTGGCCGGCTTGATGTTGCCACGACTGGCTTGATTATTGTG
ACTAATGATGGGGAGTTTGCGCACCAGATTTCACATCCTTCGTCTAATTTGTCAAAGGAA
TACATTGCAACTATTGATGGTGAAATACATAAGCGACACTTGATAGCCATTAGTGAGGGA
ACAGTCATTGATGGTGTCCATTGCACCCCAGATGCTGTGGAACTACTACCAAGGCAACCT
GATGTACCAAGACCTCGTCTGCGGATTGTGGTTCATGAAGGACGGAATCATGAAGTTCGT
GAACTTGTGAAAAATGCTGGACTTCAGCTGCGTGCGCTGAAGCGTATACGTATAGGTGGT
TTCAGGCTTCCATCAGATCTTGCGCTTGGCAAGCATGTTGAATTAAATCAAGCTAATCTG
AGGGCATTGGGTTGGAAGAGTCAAAAGTTGGATGAGGTCAAAACCTAG

Peptide Sequence

PEP ID

XP_016515929.1
PEP Infomation

PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like isoform X1 [Nicotiana tabacum]
Sequence

MATIAAAVAAASSAFTSLHLTRATPYTRRHIHTLITSSLSSSSSTEFNITFAPPKPKLNK
PEPSLPRNPNSNSDIAELGDQLYIPWIVRDEKGNLTLQSTPPARLLHDMANASTSKKNNK
KSKQIASKAATVGPTAEPKYSKAARRFYNENFRDPPQRLSKVLAASGVASRRSSEELIFQ
GRVTVNGSVCKTPQTKVDPARDVIYVNGNRLPKKLPSKVYLALNKPKGYICSSGEKETKS
VMSLFDNFVKSWDKRHPGQPKPRLFTVGRLDVATTGLIIVTNDGEFAHQISHPSSNLSKE
YIATIDGEIHKRHLIAISEGTVIDGVHCTPDAVELLPRQPDVPRPRLRIVVHEGRNHEVR
ELVKNAGLQLRALKRIRIGGFRLPSDLALGKHVELNQANLRALGWKSQKLDEVKT

Transcript Sequence

Gene sequence data has not been registered.